Some mechanics:
0. Getting ssh configured
a) First slogin to nash.math.colostate.edu and type
ssh-keygen -t dsa
followed by 3 Returns
b) Next cd to the the .ssh directory cd .ssh
c) While in the .ssh
directory, type cp id_dsa.pub authorized_keys
We will be using MPI on the Math Department's "IBM cluster
1. Check to see if you have an account on
nash.math.colostate.edu
2. From nash go to
/usr/local/mpich/examplesand copy cpi.c to your home directory ( type cp cpi.c ~).
3. Compile cpi.c by typing
mpicc cpi.c
4. Run cpi.c on
4 processors by typing
mpirun -np 4 a.out
to get output something
like:
nash> mpirun -np 4 a.out
Process 0 on nash.math.colostate.edu
Process 3 on node3
Process 1 on node1
Process 2 on node2
pi is approximately 3.1416009869231245, Error is 0.0000083333333314
wall clock time = 0.008474
#include <stdio.h>
#include "mpi.h"
int main( argc, argv )
int argc;
char **argv;
{
int rank,
size;
MPI_Init(
&argc, &argv );
MPI_Comm_size(
MPI_COMM_WORLD, &size );
MPI_Comm_rank(
MPI_COMM_WORLD, &rank );
printf(
"Hello world from process %d of %d\n", rank, size );
MPI_Finalize();
return
0;
}
#include "mpi.h"
#include <math.h>
int main(argc,argv)
int argc;
char *argv[];
{
int done
= 0, n, myid, numprocs, i;
double
PI25DT = 3.141592653589793238462643;
double
mypi, pi, h, sum, x;
MPI_Init(&argc,&argv);
MPI_Comm_size(MPI_COMM_WORLD,&numprocs);
MPI_Comm_rank(MPI_COMM_WORLD,&myid);
while
(!done)
{
if (myid == 0) {
printf("Enter the number of intervals: (0 quits) ");
scanf("%d",&n);
}
MPI_Bcast(&n, 1, MPI_INT, 0, MPI_COMM_WORLD);
if (n == 0) break;
h = 1.0 / (double) n;
sum = 0.0;
for (i = myid + 1; i <= n; i += numprocs) {
x = h * ((double)i - 0.5);
sum += 4.0 / (1.0 + x*x);
}
mypi = h * sum;
MPI_Reduce(&mypi, &pi, 1, MPI_DOUBLE, MPI_SUM, 0,
MPI_COMM_WORLD);
if (myid == 0)
printf("pi is approximately %.16f, Error is %.16f\n",
pi, fabs(pi - PI25DT));
}
MPI_Finalize();
return
0;
}
Resources:
On the GS510-511
Home Page, go to Internet
Resources and then to